Structure of PDB 6ajo Chain A Binding Site BS01

Receptor Information
>6ajo Chain A (length=202) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AGAQDFVPHTADLAELAAAAGECRGCGLYRDATQAVFGAGGRSARIMMIG
EQPGDKEDLAGLPFVGPAGRLLDRALEAADIDRDALYVTNAVKHFKFTRR
RIHKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGATAAKALLGNDFRVTQ
HRGEVLHVDDVPGDPALVATVHPSSLLRGPKEERESAFAGLVDDLRVAAD
VR
Ligand information
Receptor-Ligand Complex Structure
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PDB6ajo Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.
Resolution2.269 Å
Binding residue
(original residue number in PDB)		Q53 G67 P68 A69 H109 G140 A141 V177 H178 S180 S181 R184
Binding residue
(residue number reindexed from 1)		Q52 G66 P67 A68 H103 G134 A135 V171 H172 S174 S175 R178
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004844 uracil DNA N-glycosylase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
GO:0097506 deaminated base DNA N-glycosylase activity
Biological Process
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:6ajo, PDBe:6ajo, PDBj:6ajo
PDBsum6ajo
PubMed31101917
UniProtA0QP43

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