Structure of PDB 5zu7 Chain A Binding Site BS01
Receptor Information
>5zu7 Chain A (length=165) Species:
1335626
(Middle East respiratory syndrome-related coronavirus) [
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MPLSNFEHKVITECVTIVLGDAIQVAKCYGESVLVNAANTHLKHGGGIAG
AINAASKGAVQKESDEYILAKGPLQVGDSVLLQGHSLAKNILHVVGPDAR
AKQDVSLLSKCYKAMNAYPLVVTPLVSAGIFGVKPAVSFDYLIREAKTRV
LVVVNSQDVYKSLTI
Ligand information
Ligand ID
AMP
InChI
InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
UDMBCSSLTHHNCD-KQYNXXCUSA-N
SMILES
Software
SMILES
CACTVS 3.370
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
CACTVS 3.370
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
ACDLabs 12.01
O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N
Formula
C10 H14 N5 O7 P
Name
ADENOSINE MONOPHOSPHATE
ChEMBL
CHEMBL752
DrugBank
DB00131
ZINC
ZINC000003860156
PDB chain
5zu7 Chain A Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
5zu7
Crystal structure of MERS-CoV macro domain in complex with AMP
Resolution
1.705 Å
Binding residue
(original residue number in PDB)
D20 A21 G46 I47 L124 A127 G128 N154
Binding residue
(residue number reindexed from 1)
D21 A22 G47 I48 L125 A128 G129 N155
Annotation score
4
Enzymatic activity
Enzyme Commision number
3.4.19.12
: ubiquitinyl hydrolase 1.
External links
PDB
RCSB:5zu7
,
PDBe:5zu7
,
PDBj:5zu7
PDBsum
5zu7
PubMed
UniProt
T2B9G2
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