Structure of PDB 5zqa Chain A Binding Site BS01

Receptor Information
>5zqa Chain A (length=248) Species: 169963 (Listeria monocytogenes EGD-e) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EQPNLYLSANAAAVYSVENGEALYEQNADKVMPIASLSKLMTAFLVLEAV
DNNELSWDEKLDLVRLDDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDA
AETLGDRLDGADFPKEMNNQAKKLGMSSKTTFVSASGLDVDGKSAVSTTK
DLFLLSSKLISTHPEVLETTSKPTVTTDKGAKLESTNDLLGSIQGLDGLK
TGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLMEVGFK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain5zqa Chain A Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5zqa Crystal Structures of Penicillin-Binding Protein D2 from Listeria monocytogenes and Structural Basis for Antibiotic Specificity
Resolution1.55 Å
Binding residue
(original residue number in PDB)		D73 H185 E187
Binding residue
(residue number reindexed from 1)		D51 H163 E165
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:5zqa, PDBe:5zqa, PDBj:5zqa
PDBsum5zqa
PubMed30082290
UniProtQ8Y3M3

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