Structure of PDB 5znt Chain A Binding Site BS01

Receptor Information

>5znt Chain A (length=379) Species: 7091 (Bombyx mori) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

PNRAPPCDSSQCVLPDCFCSEDGTVIPGDLPARDVPQMITITFDDAINNN
NIELYKEIFNGKRKNPNGCDIKATYFVSHKYTNYSAVQETHRKGHEIAVH
SITHNDDERFWSNATVDDWGKEMAGMRVIIEKFSNITDNSVVGVRAPYLR
VGGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQSC
PTRSHAVWEMVMNELDRREDPSNDEYLPGCAMVDSCSNILTGDQFYNFLN
HNFDRHYEQNRAPLGLYFHAAWLKNNPEFLEAFLYWIDEILQSHNDVYFV
TMTQVIQWVQNPRTVTEAKNFEPWREKCSVEGNPACWVPHSCKLTSKEVP
GETINLQTCLRCPVNYPWLNDPTGDGHYH

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

5znt Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5znt Structural and biochemical insights into the catalytic mechanisms of two insect chitin deacetylases of the carbohydrate esterase 4 family.
Resolution	1.979 Å
Binding residue (original residue number in PDB)	D206 H261 H265
Binding residue (residue number reindexed from 1)	D45 H100 H104
Annotation score	1

Enzymatic activity

Enzyme Commision number

3.5.1.41: chitin deacetylase.

Gene Ontology

	Molecular Function
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

	Biological Process
GO:0005975	carbohydrate metabolic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:5znt, PDBe:5znt, PDBj:5znt
PDBsum	5znt
PubMed	30755482
UniProt	H9J9M0\|CDA1_BOMMO Chitin deacetylase 1 (Gene Name=CDA1)

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