Structure of PDB 5zmp Chain A Binding Site BS01

Receptor Information
>5zmp Chain A (length=305) Species: 374982 (Picosynechococcus sp. PCC 73109) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIHLIYSDQFLDHGTGRSHPESARRLTAIAQALKAVSWANQIQWHEPTAI
AFRDPLPWVRQLHDDYYLKELQKLAESGGGYWDPDTPVSPQSFDVALLAV
NACLDGVDLALQTKEPVFALVRPPGHHATRSTGMGFCLLGNVAIAAHYAL
GLAGIKKVAILDWDVHHGNGTEYLVEENPQIIYCSLHQDPAYPGTGQAHH
HGRHQNILNIPLKPGADRRIYVQKFQDVVLPYLQEFQPDLLIVSAGYDAT
AKDPLAGMNLQPQDYKVFSEFCQQLPCPILFALEGGYHLQTLAESVVATL
EPFAQ
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5zmp Chain A Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5zmp The structure of a lysine deacylase
Resolution2.19 Å
Binding residue
(original residue number in PDB)		D164 H166 D248
Binding residue
(residue number reindexed from 1)		D164 H166 D248
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004407 histone deacetylase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0000122 negative regulation of transcription by RNA polymerase II
GO:0006338 chromatin remodeling

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Molecular Function
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Biological Process
External links
PDB RCSB:5zmp, PDBe:5zmp, PDBj:5zmp
PDBsum5zmp
PubMed
UniProtB1XMP1

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