Structure of PDB 5zma Chain A Binding Site BS01

Receptor Information
>5zma Chain A (length=255) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DNEIERVFVWDLDETIIIFHSLLTGTFASRYGKDTTTSVRIGLMMEEMIF
NLADTHLFFNDLEDCDQIHVDDVNGQDLSTYNFSADGFGGVDWMRKLAFR
YRRVKEMYNTYKNNVGGLIGTPKRETWLQLRAELEALTDLWLTHSLKALN
LINSRPNCVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTGKESC
FERIMQRFGRKAVYVVIGDGVEEEQGAKKHNMPFWRISCHADLEALRHAL
ELEYL
Ligand information
Ligand ID9FX
InChIInChI=1S/C16H11FN4O2S/c17-12-4-1-3-11(9-12)15(22)21-20-10-13-5-6-14(23-13)24-16-18-7-2-8-19-16/h1-10H,(H,21,22)/b20-10+
InChIKeyDRXIKWHRYGIZNG-KEBDBYFISA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.6c1cc(cc(c1)F)C(=O)N/N=C/c2ccc(o2)Sc3ncccn3
ACDLabs 12.01c1(ncccn1)Sc2oc(cc2)\C=N\NC(c3cccc(c3)F)=O
OpenEye OEToolkits 2.0.6c1cc(cc(c1)F)C(=O)NN=Cc2ccc(o2)Sc3ncccn3
CACTVS 3.385Fc1cccc(c1)C(=O)NN=Cc2oc(Sc3ncccn3)cc2
CACTVS 3.385Fc1cccc(c1)C(=O)N/N=C/c2oc(Sc3ncccn3)cc2
FormulaC16 H11 F N4 O2 S
Name3-fluoro-N'-[(E)-{5-[(pyrimidin-2-yl)sulfanyl]furan-2-yl}methylidene]benzohydrazide
ChEMBL
DrugBank
ZINC
PDB chain5zma Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5zma Structural and Functional Analyses of an Allosteric EYA2 Phosphatase Inhibitor That Has On-Target Effects in Human Lung Cancer Cells.
Resolution3.175 Å
Binding residue
(original residue number in PDB)
T278 F282 Y294 L417 T421 D422 W424 L425 Y461 H523
Binding residue
(residue number reindexed from 1)
T15 F19 Y31 L134 T138 D139 W141 L142 Y178 H240
Annotation score1
Enzymatic activity
Enzyme Commision number 3.1.3.48: protein-tyrosine-phosphatase.
Gene Ontology
Molecular Function
GO:0004725 protein tyrosine phosphatase activity
Biological Process
GO:0007275 multicellular organism development

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5zma, PDBe:5zma, PDBj:5zma
PDBsum5zma
PubMed31285279
UniProtO00167|EYA2_HUMAN Eyes absent homolog 2 (Gene Name=EYA2)

[Back to BioLiP]