Structure of PDB 5zix Chain A Binding Site BS01
Receptor Information
>5zix Chain A (length=303) Species:
208964
(Pseudomonas aeruginosa PAO1) [
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MTWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVED
GQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLL
LQNGLGSQQAVAARLPRSRCLFASSTEGAFRDGDFRVVFAGRGHTWLGDP
RDTNAPAWLTQLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRN
GGLRQHPEEIAALCDELGQLLHASGYDAAARSLLEDVRAVIDATAANYSS
MHQDVTRGRRTEIGYLLGYACQHGQRLGLPLPRLGTLLARLQAHLRQRGL
PDR
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
5zix Chain A Residue 404 [
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Receptor-Ligand Complex Structure
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PDB
5zix
Genome-wide survey and crystallographic analysis suggests a role for both horizontal gene transfer and duplication in pantothenate biosynthesis pathways.
Resolution
2.57 Å
Binding residue
(original residue number in PDB)
G7 A8 G9 S10 L11 R31 R35 C76 N103 E127 A129 R131 E262
Binding residue
(residue number reindexed from 1)
G7 A8 G9 S10 L11 R31 R35 C76 N103 E127 A129 R131 E262
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.1.1.169
: 2-dehydropantoate 2-reductase.
Gene Ontology
Molecular Function
GO:0008677
2-dehydropantoate 2-reductase activity
GO:0016491
oxidoreductase activity
GO:0050661
NADP binding
Biological Process
GO:0015940
pantothenate biosynthetic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:5zix
,
PDBe:5zix
,
PDBj:5zix
PDBsum
5zix
PubMed
31136784
UniProt
Q9HW09
|PANE_PSEAE 2-dehydropantoate 2-reductase (Gene Name=panE)
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