Structure of PDB 5zb3 Chain A Binding Site BS01
Receptor Information
>5zb3 Chain A (length=280) Species:
37296
(Human gammaherpesvirus 8) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
LRLPASMIIDGESPRFDDSIIPRHHGACFNVFIPAPPSHVPEVFTDRDIT
ALIRAGGKDDELINKKISAKKIDHLHRQMLSFVTSRHNQAYWVSCRRETA
AAGGLQTLGAFVEEQMTWAQTVVRHGGWFDEKDIDIILDTAIFVCNAFVT
RFRLLHLSCVFDKQSELALIKQVAYLVAMGNRLVEACNLLGEVKLNFRGG
LLLAFVLTIPGMQSRRSISARGQELFRTLLEYYRPGDVMGLLNVIVMEHH
SLCRNSECAAATRAAMGSAKFNKGLFFYPL
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
5zb3 Chain A Residue 500 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5zb3
The crystal structure of KSHV ORF57 reveals dimeric active sites important for protein stability and function.
Resolution
3.506 Å
Binding residue
(original residue number in PDB)
C333 H423 C427 C432
Binding residue
(residue number reindexed from 1)
C159 H249 C253 C258
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Biological Process
External links
PDB
RCSB:5zb3
,
PDBe:5zb3
,
PDBj:5zb3
PDBsum
5zb3
PubMed
30096191
UniProt
Q2HR75
|MTA_HHV8P Post-transcriptional regulator MTA (Gene Name=ORF57)
[
Back to BioLiP
]