Structure of PDB 5z9o Chain A Binding Site BS01

Receptor Information
>5z9o Chain A (length=373) Species: 272621 (Lactobacillus acidophilus NCFM) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LEKTFYKMMLSKSFPFPVEVTYWDGKSEVYGNGTPEIHITFNEKIPMSDI
TKNASLALGEAYMDKKIEIQGSIQELINGAYQSADSFMRSSKFRKSHYDI
GNDFYKLWLDPTMTYSCAYFTDDNKDDLEQAQIAKVHHILNKLHPEKGKT
LLDIGCGWGTLMLTAAKEYGLKVTGVTLSEEQYKLVQKKIYDEGLEDVAE
VKLEDYRELGDQQWDYVTSVGMFEHVGSENLGEYFKDVAKYLKNDGVALI
HGITRQQGGATNAWINKYIFPGGYIPGLVEIISRIEEANLQVSDVEMLRR
HYQRTLEIWDKNFNNARPEIEKNMGERFCRMWDLYLQACAASFESGNIDV
VQYLLTKGPSGKSLPMTRKYMLN
Ligand information
Ligand IDCO3
InChIInChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-2
InChIKeyBVKZGUZCCUSVTD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(=O)([O-])[O-]
ACDLabs 10.04
CACTVS 3.341		[O-]C([O-])=O
FormulaC O3
NameCARBONATE ION
ChEMBL
DrugBankDB14531
ZINC
PDB chain5z9o Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5z9o Crystal structure of bacterial cyclopropane-fatty-acyl-phospholipid synthase with phospholipid.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		S134 C135 H269 Y320
Binding residue
(residue number reindexed from 1)		S116 C117 H251 Y302
Annotation score1
Enzymatic activity
Enzyme Commision number 2.1.1.79: cyclopropane-fatty-acyl-phospholipid synthase.
Gene Ontology
Molecular Function
GO:0008168 methyltransferase activity
GO:0008825 cyclopropane-fatty-acyl-phospholipid synthase activity
Biological Process
GO:0006629 lipid metabolic process
GO:0008610 lipid biosynthetic process
GO:0032259 methylation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5z9o, PDBe:5z9o, PDBj:5z9o
PDBsum5z9o
PubMed30828715
UniProtQ5FJM0

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