Structure of PDB 5yvz Chain A Binding Site BS01

Receptor Information
>5yvz Chain A (length=294) Species: 481448 (Methylacidiphilum infernorum V4) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QPIIQFDAESWEAEFTQEIQDKAIEGLESGSVLFFPKLNFPLLTEELKFL
DPTWVSNISYDPRSATLKGVEGKSEDLRLLSGLLKRYAEKTAAFLHLLFP
FYGSSLKIARTSFRPVEISGRATSARKDDTRLHVDAFPSSPTGGERILRV
FSNINPQGKPRSWRIGEPFQNYLNHLLPQLSPPAPGKRFLLYLFGITKGY
RSLYDHYMLELHDKGKLDLEYQKNSPQVAFDFPAGSTWIVFTDQVLHAVD
KGQFLLEQTFHLKVNALKHPEKSPLKLLETALNKKLVSSESFKL
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain5yvz Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5yvz Biochemical and Structural Insights into an Fe(II)/ alpha-Ketoglutarate/O2-Dependent Dioxygenase, Kdo 3-Hydroxylase (KdoO).
Resolution1.6 Å
Binding residue
(original residue number in PDB)		H146 D148 H260
Binding residue
(residue number reindexed from 1)		H133 D135 H247
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5yvz, PDBe:5yvz, PDBj:5yvz
PDBsum5yvz
PubMed30092253
UniProtB3DUR4

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