Structure of PDB 5yv5 Chain A Binding Site BS01

Receptor Information
>5yv5 Chain A (length=517) Species: 1185654 (Pyrococcus furiosus COM1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SHLEEDCVHRYGVNAFVLYRLPVVKEGMVVGIVGPNGTGKSTAVKILAGQ
LIPNLCGDNDSWDGVIRAFRGNELQNYFEKLKNGEIRPVVKPQYVDLIPK
AVKGKVIELLKKADETGKLEEVVKALELENVLDREIQHLSGGELQRVAIA
AALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAV
LDYLSDIIHVVYGEPGVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYE
IKFTKTGERVEIERETLVTYPRLVKDYGSFRLEVEPGEIKKGEVIGIVGP
NGIGKTTFVKMLAGVEEPTEGKIEWDLTVAYKPQYIKADYEGTVYELLSK
IDASKLNSNFYKTELLKPLGIIDLYDREVNELSGGELQRVAIAATLLRDA
DIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSD
RLMVFEGEPGKYGRALPPMGMREGMNRFLASIGITFRRDPDTGRPRANKE
GSVKDREQKEKGEYYYI
Ligand information
>5yv5 Chain B (length=14) Species: 2261 (Pyrococcus furiosus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
SEEEALAGLSALFG
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5yv5 The ribosomal stalk protein is crucial for the action of the conserved ATPase ABCE1
Resolution2.1 Å
Binding residue
(original residue number in PDB)		Y166 L169 I170 K172 A173 A223 A224 R227
Binding residue
(residue number reindexed from 1)		Y94 L97 I98 K100 A101 A151 A152 R155
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity

View graph for
Molecular Function
External links
PDB RCSB:5yv5, PDBe:5yv5, PDBj:5yv5
PDBsum5yv5
PubMed30010948
UniProtI6V0C7

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