Structure of PDB 5yt0 Chain A Binding Site BS01

Receptor Information
>5yt0 Chain A (length=331) Species: 272557 (Aeropyrum pernix K1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKGITQHIGASIVPADVIEKI
AEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGSVADFAILVVDIMEG
FKPQTYEALELLKERRVPFLIAANKIDRIPGWKPNPDAPFIETIRRQDPK
VREILEQRVYEIVGKMYEAGLPAELFTRIKDFRRKIAIVPVSARTGEGIP
ELLAVLAGLTQTYLKERLRYAEGPAKGVVLEVKEMQGFGTVVDAVIYDGV
LKKEDIIVVGGREGPIVTRVRALLMPAPFVQVDRVYAAAGVRIAAPGLDD
VIAGSPIYAAESEEEARKLMEAVQREIEELR
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5yt0 The Interaction between the Ribosomal Stalk Proteins and Translation Initiation Factor 5B Promotes Translation Initiation
Resolution1.89 Å
Binding residue
(original residue number in PDB)		V73 I74 R162 R169 F193 T194 R195 I196 K197 F199
Binding residue
(residue number reindexed from 1)		V57 I58 R145 R152 F176 T177 R178 I179 K180 F182
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:5yt0, PDBe:5yt0, PDBj:5yt0
PDBsum5yt0
PubMed29844065
UniProtQ9Y9B3|IF2P_AERPE Probable translation initiation factor IF-2 (Gene Name=infB)

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