Structure of PDB 5yjs Chain A Binding Site BS01

Receptor Information
>5yjs Chain A (length=370) Species: 4072 (Capsicum annuum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NPYLFESAGFASAFRTGEGHLKILEKFTQRSELFRGIEKYRVAVLEFEPQ
SFMVPNHCDGEVIYVVAKGAGIISIAEQKAKYYFVLKKADVKRVPAGATI
YFVNRDANQKLVVYVLVKSTNAPGEAQEYFSGGGQNPESFYRAFSSDILE
KAFNTAADRLERLFGQQKQGPVIKASEEQIRAISQYASEPTAATGGEIRG
PFNLLKGAPLFESRFGQFFEASPELFAQLRDLDVAVGYMNINQGGMVLPY
YNTKSTRLVMVIEGNGRFEMACPHAGDVHYQKVRGNLNVGDLLVVPAAHP
ITFTATGGSNLRMVGFGINAQNNKKKFLAGKQNIWRNVDREAKELSFNMP
GREVEEIFQKQDESYFVAGP
Ligand information
Ligand IDSAL
InChIInChI=1S/C7H6O3/c8-6-4-2-1-3-5(6)7(9)10/h1-4,8H,(H,9,10)
InChIKeyYGSDEFSMJLZEOE-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=C(O)c1ccccc1O
OpenEye OEToolkits 1.5.0c1ccc(c(c1)C(=O)O)O
CACTVS 3.341OC(=O)c1ccccc1O
FormulaC7 H6 O3
Name2-HYDROXYBENZOIC ACID;
SALICYLIC ACID
ChEMBLCHEMBL424
DrugBankDB00936
ZINCZINC000000001554
PDB chain5yjs Chain A Residue 603 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5yjs Structure-guided identification of function: role ofCapsicum annuumvicilin during oxidative stress.
Resolution2.16 Å
Binding residue
(original residue number in PDB)		F363 G382 Y395 R402 V404 G480 K490
Binding residue
(residue number reindexed from 1)		F218 G237 Y250 R257 V259 G315 K325
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5yjs, PDBe:5yjs, PDBj:5yjs
PDBsum5yjs
PubMed30181145
UniProtA0A452CSM5

[Back to BioLiP]