Structure of PDB 5yeu Chain A Binding Site BS01

Receptor Information
>5yeu Chain A (length=381) Species: 212035 (Acanthamoeba polyphaga mimivirus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATYEDLISHKHDYPKEIYKESHYIRRNTRLDVIKKIPQFEQKSKEWLKQR
TESLTATAISVVFDEDPYKHPIVILLDKCGRGLHGNKYEQIGTMFYSFRN
NVEVGEYGLLQHSGHKFIAASPDGICSKKANTGGLSKLVGRLLEIKFPFS
REINNSGDLDGDICPHYYFLQVQTQLYVTEMDECDFLQCKIDEYDSWEDF
VKDSNPIVPGLSKTTNLEKGCLIQLSDKNLIGSDDKEKCLYNSKYIYPPK
LHMTNEEIAAWISSEIANYHNNDLSENYMIDAVIYWRLSQVTCNLIKLNK
EAFEEKIPLLQQFWDYVLFYRQHSDKLDKLIKFVEKVKEDNSAEIFSYIN
EDFLSLNKDSKYEPLYQEETEWRKKYNQIKA
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain5yeu Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5yeu Structural and Mechanistic Analyses Reveal a Unique Cas4-like Protein in the Mimivirus Virophage Resistance Element System.
Resolution3.001 Å
Binding residue
(original residue number in PDB)
D268 E289
Binding residue
(residue number reindexed from 1)
D123 E144
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5yeu, PDBe:5yeu, PDBj:5yeu
PDBsum5yeu
PubMed30428313
UniProtQ5UQV1|YR354_MIMIV Uncharacterized protein R354 (Gene Name=MIMI_R354)

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