Structure of PDB 5y8b Chain A Binding Site BS01

Receptor Information

>5y8b Chain A (length=263) Species: 357808 (Roseiflexus sp. RS-1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

GSERIVSLNGDITEIIFALGMGEYVVGVDSSATYPPERTKMLPNIGYQRR
LSAEGILSLNPTLVIGDEAAGPPETLAQIRAAGVPLAITADPPSLDAPQQ
KIRFVAQALGIPQRGERLAAQVEAEIAAARDLARRITNPPHVLFLYLRGT
DVQQVAGRNTAVDVMIAAAGGINAAADAGIVEFKPLSPEVVIAAQPDVLL
VLDKGLESVGGVDGLLKIPGLADTPAGRQRRIIALDDLYLLGMGPRTGQA
LTDLTIAFYDAAQ

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

5y8b Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5y8b Structural basis for binding and transfer of heme in bacterial heme-acquisition systems
Resolution	2.4 Å
Binding residue (original residue number in PDB)	D104 D160 D184
Binding residue (residue number reindexed from 1)	D11 D67 D91
Annotation score	4

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:5y8b, PDBe:5y8b, PDBj:5y8b
PDBsum	5y8b
PubMed	28913898
UniProt	A5UZ69

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