Structure of PDB 5y4c Chain A Binding Site BS01
Receptor Information
>5y4c Chain A (length=249) Species:
90322
(Sphingomonas sp. A1) [
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VAPLDLVQPISDYKIYVSENLQTLVRDTREFTNAVKAGDVAKAKKLFAST
RMSYERIEPIAELFSDLDASIDSRADDHEKAEKDPAFFGFHRIEYGLFAQ
NSAKGLAPVADKLMADVLELQKRIRGLTFPPEKVVGGAAVLMEEVAATKI
SGEEDRYSHTDLWDFQANFEGAKKIVDLFRPLVVKDNRAFADKVDANFDT
VFKTLAKYRTADGGFELYGKLSERDRKVLAGRVNTLAEDLSKMRGLLGL
Ligand information
Ligand ID
CU
InChI
InChI=1S/Cu/q+2
InChIKey
JPVYNHNXODAKFH-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Cu+2]
CACTVS 3.341
[Cu++]
Formula
Cu
Name
COPPER (II) ION
ChEMBL
DrugBank
DB14552
ZINC
PDB chain
5y4c Chain A Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
5y4c
Binding mode of metal ions to the bacterial iron import protein EfeO
Resolution
2.701 Å
Binding residue
(original residue number in PDB)
E79 E82 D96 E178
Binding residue
(residue number reindexed from 1)
E55 E58 D72 E154
Annotation score
3
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5y4c
,
PDBe:5y4c
,
PDBj:5y4c
PDBsum
5y4c
PubMed
28919419
UniProt
Q25C86
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