Structure of PDB 5y28 Chain A Binding Site BS01

Receptor Information
>5y28 Chain A (length=268) Species: 85962 (Helicobacter pylori 26695) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QIQSMPKVKERVSVPSKDDTIYSYHDSIKDSIKAVVNISTMERALGSGVI
ISKDGYIVTNNHVIDGADKIKVTIPGSNKEYSATLVGTDSESDLAVIRIT
KDNLPTIKFSDSNDISVGDLVFAIGNPFGVGESVTQGIVSALNNFIQTDA
SINPGNSGGALIDSRGGLVGINTAIINHGIGFAIPSNMVKDTVTQLIKTG
KIERGYLGVGLQDLSGDLQNSWDLITEVNGKKVKNTNELRNLIGSMLPNQ
RVTLKVIRDKKERAFTLT
Ligand information
Receptor-Ligand Complex Structure
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PDB5y28 The unique trimeric assembly of the virulence factor HtrA fromHelicobacter pylorioccurs via N-terminal domain swapping.
Resolution3.08607 Å
Binding residue
(original residue number in PDB)		Y275 M340 P342
Binding residue
(residue number reindexed from 1)		Y206 M246 P248
Enzymatic activity
Enzyme Commision number 3.4.21.107: peptidase Do.
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:5y28, PDBe:5y28, PDBj:5y28
PDBsum5y28
PubMed30936204
UniProtG2J5T2

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