Structure of PDB 5xeg Chain A Binding Site BS01

Receptor Information
>5xeg Chain A (length=219) Species: 39947 (Oryza sativa Japonica Group) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QYLRPGMVLLKKFLKHDDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQ
MMCLGKNWDPSYGDTRPFDGAQPPSIPEVFSKIVKDAIQASNEFLRQKAR
NDVEELPPLSPDICLVNFYTSSGKLGLHQDKDETKPSLHKGLPVVSFSLG
DTAEFLYGDVNDVDKASKVDLESGDVLIFGGKSRLIFHGVSRIKPKTAPN
WLTDEAKLRPGRLNLTFRQ
Ligand information
Ligand IDAKG
InChIInChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)
InChIKeyKPGXRSRHYNQIFN-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=C(O)C(=O)CCC(=O)O
OpenEye OEToolkits 1.7.6C(CC(=O)O)C(=O)C(=O)O
CACTVS 3.385OC(=O)CCC(=O)C(O)=O
FormulaC5 H6 O5
Name2-OXOGLUTARIC ACID
ChEMBLCHEMBL1686
DrugBankDB08845
ZINCZINC000001532519
PDB chain5xeg Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5xeg Identification and analysis of adenine N6-methylation sites in the rice genome.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		R188 N268 Y270 L276 H279 H339 V341 R363 N365
Binding residue
(residue number reindexed from 1)		R42 N117 Y119 L125 H128 H188 V190 R212 N214
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links