Structure of PDB 5wze Chain A Binding Site BS01
Receptor Information
>5wze Chain A (length=442) Species:
208964
(Pseudomonas aeruginosa PAO1) [
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MIRIPKSEYARRRKALMAQMEPNSIAILPAAPMYIRNRDVEHVYRQDSDF
QYLTGFPEPEAVMALIPGRAHGEYVLFCRERDPERELWDGLRAGQDGAIG
QYGADDAFPIGDIDDILPGLIEGRDRVYYALGANPDFDRRLMDWINVIRS
KARQGAQPPNEFVALDHLLHDQRLYKSANEVKVMRYAAEVSARAHIRAME
VCRPGLFEYHLEAELEYEFRKGGAKMPAYGSIVAAGRNACILHYRENDAA
IKDGDLILIDAGCEIDCYASDITRTFPANGRFSPEQKAIYELVLEANMAA
FDYIAPGRHWNEAHEATVRVITAGLVRLGLLEGDVDELIAHEAYKAFYMH
RAGHWLGMDVHDVGEYRVGGEWRVLEPGMAMTVEPGIYIAPDNTTVAKKW
RGIGVRIEDDVVVTRNGCEVLTNGVPKTVAEIEALMAAAKSE
Ligand information
Ligand ID
PRO
InChI
InChI=1S/C5H9NO2/c7-5(8)4-2-1-3-6-4/h4,6H,1-3H2,(H,7,8)/t4-/m0/s1
InChIKey
ONIBWKKTOPOVIA-BYPYZUCNSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C1C[C@H](NC1)C(=O)O
CACTVS 3.341
OC(=O)[C@@H]1CCCN1
CACTVS 3.341
OC(=O)[CH]1CCCN1
OpenEye OEToolkits 1.5.0
C1CC(NC1)C(=O)O
ACDLabs 10.04
O=C(O)C1NCCC1
Formula
C5 H9 N O2
Name
PROLINE
ChEMBL
CHEMBL54922
DrugBank
DB00172
ZINC
ZINC000000895360
PDB chain
5wze Chain A Residue 504 [
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Receptor-Ligand Complex Structure
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PDB
5wze
Structure-Function Relationship of Aminopeptidase P from Pseudomonas aeruginosa.
Resolution
1.783 Å
Binding residue
(original residue number in PDB)
H243 H350 H361
Binding residue
(residue number reindexed from 1)
H243 H350 H361
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004177
aminopeptidase activity
GO:0008237
metallopeptidase activity
GO:0030145
manganese ion binding
GO:0046872
metal ion binding
GO:0070006
metalloaminopeptidase activity
Biological Process
GO:0006508
proteolysis
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5wze
,
PDBe:5wze
,
PDBj:5wze
PDBsum
5wze
PubMed
29259588
UniProt
Q9HTW6
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