Structure of PDB 5w9a Chain A Binding Site BS01
Receptor Information
>5w9a Chain A (length=193) Species:
9544
(Macaca mulatta) [
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DHCARHGEKLLLFCQEDSKVICWLCKDSQEHRGHHTFLMEEVAQEYHVKL
QTALEMLRQKQQEAEKLEADIREEKASWKIQIDYDKTNVSADFEQLREIL
DWEESNELQNLEKEEEDILKSLTKSETEMVQQTQYMRELISELEHRLQGS
MMDLLQGVDGIIKRIENMTLKKPKTFHKNQRRVFRAPDLKGML
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
5w9a Chain A Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
5w9a
A helical LC3-interacting region mediates the interaction between the retroviral restriction factor Trim5 alpha and mammalian autophagy-related ATG8 proteins.
Resolution
2.74 Å
Binding residue
(original residue number in PDB)
C97 C116
Binding residue
(residue number reindexed from 1)
C3 C22
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.3.2.27
: RING-type E3 ubiquitin transferase.
Gene Ontology
Molecular Function
GO:0008270
zinc ion binding
View graph for
Molecular Function
External links
PDB
RCSB:5w9a
,
PDBe:5w9a
,
PDBj:5w9a
PDBsum
5w9a
PubMed
30282803
UniProt
Q0PF16
|TRIM5_MACMU Tripartite motif-containing protein 5 (Gene Name=TRIM5)
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