Structure of PDB 5v4d Chain A Binding Site BS01

Receptor Information
>5v4d Chain A (length=127) Species: 632 (Yersinia pestis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NAKSVIETKNAPSAIGPYSQAICFNGILYASGQIPINPDTGDLVENDIEK
QTRQVLKNIDAVLLQAGTTKDKIVKTTIFITNINNSSQVNDIYADYFKGT
IFPARSTVEVSALPKGALVEIEVIAGV
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5v4d Chain A Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5v4d Crystal Structure of the Protein of Unknown Function of the Conserved Rid Protein Family YyfA from Yersinia pestis
Resolution1.6 Å
Binding residue
(original residue number in PDB)		D90 D94
Binding residue
(residue number reindexed from 1)		D91 D95
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0019239 deaminase activity
GO:0046872 metal ion binding
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Cellular Component
External links
PDB RCSB:5v4d, PDBe:5v4d, PDBj:5v4d
PDBsum5v4d
PubMed
UniProtA0A3N4B564

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