Structure of PDB 5uyh Chain A Binding Site BS01

Receptor Information
>5uyh Chain A (length=272) Species: 632 (Yersinia pestis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TAKKFKVVTTFTIIQDIAQNIAGDVAVVESITKPGAEIHDYQPTPRDIVK
AQSADLILWNGMNLERWFEKFFESIKDVPSAVVTAGITPLPIREGPYSGI
ANPHAWMSPSNALIYIENIRKALVEHDPAHAETYNRNAQAYAEKIKALDA
PLRERLSRIPAEQRWLVTSEGAFSYLAKDYGFKEVYLWPINAEQQGIPQQ
VRHVIDIIRENKIPVVFSESTISDKPAKQVSKETGAQYGGVLYVDSLSGE
KGPVPTYISLINMTVDTIAKGF
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain5uyh Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5uyh Crystal structure of Yersinia pestis virulence factor YfeA reveals two polyspecific metal-binding sites.
Resolution1.99 Å
Binding residue
(original residue number in PDB)
H76 H141 E207 N228 D282
Binding residue
(residue number reindexed from 1)
H39 H104 E170 N191 D245
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0007155 cell adhesion
GO:0030001 metal ion transport

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5uyh, PDBe:5uyh, PDBj:5uyh
PDBsum5uyh
PubMed28695856
UniProtQ56952|YFEA_YERPE Iron-binding protein YfeA (Gene Name=yfeA)

[Back to BioLiP]