Structure of PDB 5tnx Chain A Binding Site BS01
Receptor Information
>5tnx Chain A (length=370) Species:
398577
(Burkholderia ambifaria MC40-6) [
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DTRAVTAAVARAAGAPFSIEPARIRAPRGDEVLVRVVATGLCHTDLIVRD
QYYPVPLPAVLGHEGAGVVEAVGPNVKTLAAGDHVVLTYGACGHCASCAG
GHGAYCRQFFALNFGGADADGQTALRDAAGEPLHDHFFAQSSFASYALAR
ENNAIKVPKEAPLELLGPLGCGIQTGAGAVINSLAVRTGSSFASFGAGAV
GMSAVMAARIAGATTIIAVDIVPSRLALALELGATHAINSKEVDVVDAIR
EITGGGVDYALESTGLPAVLSQGIDALGSRGTMGVVGAPKLGTKAEFDVN
SLLLGGHTIRGIVEGDSVPQTFIPQLVQLHLQGRFPFDRLVKFYPLEQIN
QAAADSSSGITLKPILRLPH
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
5tnx Chain A Residue 400 [
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Receptor-Ligand Complex Structure
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PDB
5tnx
Crystal structure of Alcohol dehydrogenase zinc-binding domain protein from Burkholderia ambifaria
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
C97 C100 C103 C111
Binding residue
(residue number reindexed from 1)
C92 C95 C98 C106
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
C47 H48 T49 I52 H68 E69 C97 C100 C103 C111 F115 C176 T180 K368
Catalytic site (residue number reindexed from 1)
C42 H43 T44 I47 H63 E64 C92 C95 C98 C106 F110 C171 T175 K363
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0008270
zinc ion binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051903
S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity
Biological Process
GO:0046294
formaldehyde catabolic process
Cellular Component
GO:0005829
cytosol
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Molecular Function
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Cellular Component
External links
PDB
RCSB:5tnx
,
PDBe:5tnx
,
PDBj:5tnx
PDBsum
5tnx
PubMed
UniProt
B1Z4S6
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