Structure of PDB 5tg0 Chain A Binding Site BS01

Receptor Information
>5tg0 Chain A (length=137) Species: 335992 (Candidatus Pelagibacter ubique HTCC1062) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LVPRGSHMIFVKNLASVLSQEWSSTEKYPGVRWKFLIDADFDGSSGLSLG
FAEIAPGGDLTLHYHSPAEIYVVTNGKGILNKSGKLETIKKGDVVYIAGN
AEHALKNNGKETLEFYWIFPTDRFSEVEYFPAKQKSG
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain5tg0 Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5tg0 Structural and Biochemical Insights into Dimethylsulfoniopropionate Cleavage by Cofactor-Bound DddK from the Prolific Marine Bacterium Pelagibacter.
Resolution1.44 Å
Binding residue
(original residue number in PDB)
H58 E62 Y64 H96
Binding residue
(residue number reindexed from 1)
H65 E69 Y71 H103
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5tg0, PDBe:5tg0, PDBj:5tg0
PDBsum5tg0
PubMed28511016
UniProtQ4FNM4

[Back to BioLiP]