Structure of PDB 5tdd Chain A Binding Site BS01
Receptor Information
>5tdd Chain A (length=72) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GSLCGRVFKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGG
GGFCDCGDTEAWKEGPYCQKHE
Ligand information
>5tdd Chain B (length=4) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
HIFS
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5tdd
Bound Waters Mediate Binding of Diverse Substrates to a Ubiquitin Ligase.
Resolution
1.55 Å
Binding residue
(original residue number in PDB)
T120 S143 G147 F148 D150
Binding residue
(residue number reindexed from 1)
T25 S48 G52 F53 D55
Enzymatic activity
Enzyme Commision number
2.3.2.27
: RING-type E3 ubiquitin transferase.
Gene Ontology
Molecular Function
GO:0008270
zinc ion binding
GO:0061630
ubiquitin protein ligase activity
Biological Process
GO:0071596
ubiquitin-dependent protein catabolic process via the N-end rule pathway
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5tdd
,
PDBe:5tdd
,
PDBj:5tdd
PDBsum
5tdd
PubMed
28392261
UniProt
Q8IWV8
|UBR2_HUMAN E3 ubiquitin-protein ligase UBR2 (Gene Name=UBR2)
[
Back to BioLiP
]