BioLiP

Receptor Information

>5ta1 Chain A (length=627) Species: 820 (Bacteroides uniformis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SQTHVQLNLNVKHKLGDVTEFNRPKFINFHATINENYWDSANKIADLRDD
LIRKYDVYVGRETGMIKTVLRNVKEDPERPGFADPDDLARLCSQNKKRYV
QNTKVHPYEKYSNLILCNQFSPFYPDGTKTLKGWALSQKDTEDEPFGTAS
GEFYGRYIKEYFGEGGESGEPKPGFCEVINEPLWDIYDKPKAPKSSITKL
FEFHSTIAAQVKKFNPDMKVGGYCTAFPDFELQNFGRWNARWKQFIDIAG
KDMDFFTIHLYDFPCKDGKQMYRKGSNMEATMDMIEQYSMIKLGEVKPLM
ISEYSAQTHDYNRKPWSPYRDWLRLKSTNSMLMQFMERTDNICYAMPFAM
LKSEWGYNPKTGLAHTARMLRRENEPESFTGEYVYSELIKFYQLWKDVKG
TRVETNCDNPDIMCDAYVDGKNVYFIINNLDFKPVDLNLSVNGTSKDAKS
IEVRHLYLKGGKDGVPILDVYDAKSLDHFTLETEATCVICYNFDRKVKIN
ETMEEVKYYATDYLKEIAAGKELVFNINNVKKTEYGEAVIRLGLGRNHGL
SLLPELLVNGKKVDIPDNFRGDVQKDRASFFGVIEVPVDYSILKGNNTIS
LKFPDNGGHVSTVTMQIFNFSNNIRGI

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

5ta1 Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5ta1 Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
Resolution	2.3 Å
Binding residue (original residue number in PDB)	P247 F249 R256
Binding residue (residue number reindexed from 1)	P228 F230 R237
Annotation score	4

Enzyme Commision number

	Molecular Function
GO:0046872	metal ion binding

PDB	RCSB:5ta1, PDBe:5ta1, PDBj:5ta1
PDBsum	5ta1
PubMed	29535379
UniProt	A0A2D0TCD3

[Back to BioLiP]

Structure of PDB 5ta1 Chain A Binding Site BS01