Structure of PDB 5r5e Chain A Binding Site BS01

Receptor Information
>5r5e Chain A (length=291) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DPEVTLLLQCPGGGLPQEQIQAELSPAHDRRPLPGGDEAITAIWETRLKA
QPWLFDAPKFRLHSATLAPIGSRGPQLLLRLGLTSYRDFLGTNWSSSAAW
LRQQGATDWGDTQAYLADPLGVGAALATADDFLVFLRRSRQVAEAPGLVD
VPGGHPEPQDLAGQLVVHELFSSVLQEICDEVNLPLLTLSQPLLLGIARN
ETSAGRASAEFYVQCSLTSEQVRKHYLSGGPEAHESTGIFFVETQNVRRL
PETEMWAELCPSAKGAIILYNRVQGSPTGAALGSPALLPPL
Ligand information
Ligand IDGV1
InChIInChI=1S/C10H13N3S/c1-6-7(2)14-10-8(6)9(13(3)4)11-5-12-10/h5H,1-4H3
InChIKeyYFDMPSHJDVETSL-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CN(C)c1ncnc2sc(C)c(C)c12
OpenEye OEToolkits 2.0.6Cc1c(sc2c1c(ncn2)N(C)C)C
FormulaC10 H13 N3 S
Name~{N},~{N},5,6-tetramethylthieno[2,3-d]pyrimidin-4-amine
ChEMBL
DrugBank
ZINCZINC000000784866
PDB chain5r5e Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5r5e PanDDA analysis group deposition
Resolution1.58 Å
Binding residue
(original residue number in PDB)		K60 Y87 F90 W95 H156 R218
Binding residue
(residue number reindexed from 1)		K59 Y86 F89 W94 H155 R206
Annotation score1
Enzymatic activity
Enzyme Commision number 3.6.1.45: UDP-sugar diphosphatase.
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0008768 UDP-sugar diphosphatase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
GO:0052751 GDP-mannose hydrolase activity
Cellular Component
GO:0005654 nucleoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:5r5e, PDBe:5r5e, PDBj:5r5e
PDBsum5r5e
PubMed
UniProtQ9BRQ3|NUD22_HUMAN Uridine diphosphate glucose pyrophosphatase NUDT22 (Gene Name=NUDT22)

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