Structure of PDB 5q17 Chain A Binding Site BS01

Receptor Information
>5q17 Chain A (length=224) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HMELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEAFSAEENFLILTEMA
TNHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLP
SGHSDLLEARIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVIL
SPDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELR
TFNHHHAEMLMSHKFTPLLCEIWD
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5q17 D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		V303 E304 K307 H317 Q320 I321 L324 K325
Binding residue
(residue number reindexed from 1)		V58 E59 K62 H72 Q75 I76 L79 K80
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004879 nuclear receptor activity
GO:0032052 bile acid binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0038183 bile acid signaling pathway

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5q17, PDBe:5q17, PDBj:5q17
PDBsum5q17
PubMed29204945
UniProtQ96RI1|NR1H4_HUMAN Bile acid receptor (Gene Name=NR1H4)

[Back to BioLiP]