Structure of PDB 5q11 Chain A Binding Site BS01
Receptor Information
>5q11 Chain A (length=221) Species:
9606
(Homo sapiens) [
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MELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEAFSAEENFLILTEMAT
NHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPS
GHSDLLEARIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILS
PDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPNPQHFACLLGRLTELRTF
NHHHAEMLMSHKFTPLLCEIW
Ligand information
>5q11 Chain B (length=12) Species:
9606
(Homo sapiens) [
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DHQLLRYLLDKD
Receptor-Ligand Complex Structure
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PDB
5q11
D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
K307 H317 I321 K325 L468 E471
Binding residue
(residue number reindexed from 1)
K61 H71 I75 K79 L216 E219
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004879
nuclear receptor activity
GO:0032052
bile acid binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0038183
bile acid signaling pathway
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Molecular Function
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Biological Process
External links
PDB
RCSB:5q11
,
PDBe:5q11
,
PDBj:5q11
PDBsum
5q11
PubMed
29204945
UniProt
Q96RI1
|NR1H4_HUMAN Bile acid receptor (Gene Name=NR1H4)
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