Structure of PDB 5q10 Chain A Binding Site BS01
Receptor Information
>5q10 Chain A (length=227) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MELTPDQQTLLHFIMDSYNKQRMPQEITNKILKEAFSAEENFLILTEMAT
NHVQVLVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPS
GHSDLLEARIRNSGISDEYITPMFSFYKSIGELKMTQEEYALLTAIVILS
PDRQYIKDREAVEKLQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRT
FNHHHAEMLMSWRVNDHKFTPLLCEIW
Ligand information
>5q10 Chain B (length=10) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
HQLLRYLLDK
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5q10
D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
V303 K307 H317 Q320 I321
Binding residue
(residue number reindexed from 1)
V57 K61 H71 Q74 I75
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004879
nuclear receptor activity
GO:0032052
bile acid binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0038183
bile acid signaling pathway
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5q10
,
PDBe:5q10
,
PDBj:5q10
PDBsum
5q10
PubMed
29204945
UniProt
Q96RI1
|NR1H4_HUMAN Bile acid receptor (Gene Name=NR1H4)
[
Back to BioLiP
]