Structure of PDB 5o5h Chain A Binding Site BS01
Receptor Information
>5o5h Chain A (length=112) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MQLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFT
MKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQGGA
VLRQARRQAEKM
Ligand information
Ligand ID
9LK
InChI
InChI=1S/C17H14ClN3O3/c1-10-16(23-11(2)20-10)17(22)21-13-5-8-15(19-9-13)24-14-6-3-12(18)4-7-14/h3-9H,1-2H3,(H,21,22)
InChIKey
NKGOFWDSBBVHLO-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
Cc1oc(c(C)n1)C(=O)Nc2ccc(Oc3ccc(Cl)cc3)nc2
OpenEye OEToolkits 2.0.6
Cc1c(oc(n1)C)C(=O)Nc2ccc(nc2)Oc3ccc(cc3)Cl
Formula
C17 H14 Cl N3 O3
Name
~{N}-[6-(4-chloranylphenoxy)pyridin-3-yl]-2,4-dimethyl-1,3-oxazole-5-carboxamide
ChEMBL
CHEMBL4282392
DrugBank
ZINC
PDB chain
5o5h Chain A Residue 801 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5o5h
Structure-based discovery of selective BRPF1 bromodomain inhibitors.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
F653 V657 P658 Y707 N708 F714
Binding residue
(residue number reindexed from 1)
F26 V30 P31 Y80 N81 F87
Annotation score
1
Binding affinity
PDBbind-CN
: -logKd/Ki=4.12,IC50>75uM
BindingDB: Kd=>75000nM
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5o5h
,
PDBe:5o5h
,
PDBj:5o5h
PDBsum
5o5h
PubMed
29902720
UniProt
P55201
|BRPF1_HUMAN Peregrin (Gene Name=BRPF1)
[
Back to BioLiP
]