Structure of PDB 5o0t Chain A Binding Site BS01
Receptor Information
>5o0t Chain A (length=206) Species:
56107
(Cylindrospermum stagnale PCC 7417) [
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GSAYIKYYIENNWVKIAFLALYVFVNMFFFMSAVEKYESQGANLYVQIAR
GCGATLNLNGALILIPMLRHFMTWLRKTTINNYIPIDESIEFHKLVGQVM
FALAIVHTGAHFLNYTTLPIPFAQSLFGTKAGISGFLLLLVFIIMWVTAQ
APIRKGGKFALFYIAHMGYVLWFALALIHGPVFWQWVLLPVVGFIIELVI
RWKAAE
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
5o0t Chain A Residue 504 [
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Receptor-Ligand Complex Structure
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PDB
5o0t
Crystal structures and atomic model of NADPH oxidase.
Resolution
2.05 Å
Binding residue
(original residue number in PDB)
I269 M273 H299 G303 F348 M351 A355 R360 F368 H372 Y375 W378
Binding residue
(residue number reindexed from 1)
I63 M67 H93 G97 F142 M145 A149 R154 F162 H166 Y169 W172
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5o0t
,
PDBe:5o0t
,
PDBj:5o0t
PDBsum
5o0t
PubMed
28607049
UniProt
K9WT99
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