Structure of PDB 5nq1 Chain A Binding Site BS01

Receptor Information
>5nq1 Chain A (length=276) Species: 9823 (Sus scrofa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MGPHSLSYFSTAVSRPDRGDSRFIAVGYVDDTQFVRFDSDAPNPRMEPRA
PWIQQEGQEYWDRNTRNVMGSAQINRVNLKTLRGYYNQSEAGSHTLQWMY
GCYLGPDGLLLRGYDQFAYDGADYLALNEDLRSWTAADMAAQISKRKWEA
ADAAEHWRSYLQGTCVESLRRYLQMGKDTLQRAEPPKTHVTRHPSSDLGV
TLRCWALGFHPKEISLTWQREGQDQSQDMELVETRPSGDGTFQKWAALVV
PPGEEQSYTCHVQHEGLQEPLTLRWD
Ligand information
>5nq1 Chain C (length=9) Species: 11309 (unidentified influenza virus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
DFEREGYSL
Receptor-Ligand Complex Structure
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PDB5nq1 Induction of influenza-specific local CD8 T-cells in the respiratory tract after aerosol delivery of vaccine antigen or virus in the Babraham inbred pig.
Resolution2.14 Å
Binding residue
(original residue number in PDB)		Y8 M46 R63 N64 R66 N67 V68 S71 I74 N78 Y85 W98 Y100 S144 K147 W148 A153 H156 Y160 S168
Binding residue
(residue number reindexed from 1)		Y8 M46 R63 N64 R66 N67 V68 S71 I74 N78 Y85 W98 Y100 S144 K147 W148 A153 H156 Y160 S168
Enzymatic activity
Enzyme Commision number ?
External links