Structure of PDB 5nmi Chain A Binding Site BS01

Receptor Information

>5nmi Chain A (length=444) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEK
NNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKA
LSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFN
YLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAG
GLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQICHREDGLPLA
HVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATN
KLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATE
SEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAE
VDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNRIRSGMFWLR

Ligand information

>5nmi Chain X (length=22) Species: 9913 (Bos taurus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

RNWVPTAQLWGAVGAVGLVSAT

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5nmi New paradigms for understanding and step changes in treating active and chronic, persistent apicomplexan infections.
Resolution	3.5 Å
Binding residue (original residue number in PDB)	T347 S348 R408 W443 R445
Binding residue (residue number reindexed from 1)	T346 S347 R407 W442 R444

Enzymatic activity

Catalytic site (original residue number in PDB)	Y57 E60 H61 E130 E137
Catalytic site (residue number reindexed from 1)	Y56 E59 H60 E129 E136
Enzyme Commision number	?

Gene Ontology

	Molecular Function
GO:0046872	metal ion binding

	Cellular Component
GO:0005739	mitochondrion
GO:0005743	mitochondrial inner membrane

View graph for
Molecular Function

View graph for
Cellular Component

External links

PDB	RCSB:5nmi, PDBe:5nmi, PDBj:5nmi
PDBsum	5nmi
PubMed	27412848
UniProt	P31800\|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial (Gene Name=UQCRC1)

[Back to BioLiP]