Structure of PDB 5nfm Chain A Binding Site BS01

Receptor Information
>5nfm Chain A (length=75) Species: 1286640 (Sinorhizobium meliloti 2011) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MAPGDIEDMIKAGIPGARVTIRDLAGDGDHYAAEVVAEAFRGKTRVQQHQ
MVYNALKGNMGGILHALALQTSAPE
Ligand information
Ligand IDCU
InChIInChI=1S/Cu/q+2
InChIKeyJPVYNHNXODAKFH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Cu+2]
CACTVS 3.341[Cu++]
FormulaCu
NameCOPPER (II) ION
ChEMBL
DrugBankDB14552
ZINC
PDB chain5nfm Chain A Residue 102 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5nfm Sinorhizobium meliloti YrbA binds divalent metal cations using two conserved histidines.
Resolution0.8 Å
Binding residue
(original residue number in PDB)		H32 H67
Binding residue
(residue number reindexed from 1)		H30 H65
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5nfm, PDBe:5nfm, PDBj:5nfm
PDBsum5nfm
PubMed32970113
UniProtA0A452CS62

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