Structure of PDB 5n9f Chain A Binding Site BS01

Receptor Information
>5n9f Chain A (length=859) Species: 7227 (Drosophila melanogaster) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IRLGCNVSAPSGVLERVKELMEDYSRAPDAKFQQQFRHLLSVNFEEFVAE
TKERNADLDWVNPKLDERLQLELGQRQLEENAKKRLEARKKLPTMKYADD
IIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPR
RISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQ
QLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSA
TVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQKPPERRM
KHEAMIEPYLRRIRNSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENE
PEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGE
QQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETN
IQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEIL
RSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQ
TGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFY
SPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKN
FLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAI
IGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGF
DSAYFVYFQRQKSTDLFLLDSTMVFPMALIIFGDGVEAGVTQNTPYLCVA
KTYYFKCNRETADVVIQLRSNLEKLLLKKALYPAPIEENGYEKQLIKAIE
LLLSLDERL
Ligand information
Receptor-Ligand Complex Structure
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PDB5n9f Structural and mechanistic insights into DHX36-mediated innate immunity and G-quadruplex unfolding
Resolution2.969 Å
Binding residue
(original residue number in PDB)
R211 R212 R239 T255 G257 V258 Q261 Q262 S265 G431 Y432 H463 S464 L465 T489 I490 I491 T494 S495 K511 T513 L524 P635 I636 D637 S664 D680 R793 H809 P810 S811 S833
Binding residue
(residue number reindexed from 1)
R150 R151 R178 T194 G196 V197 Q200 Q201 S204 G361 Y362 H393 S394 L395 T419 I420 I421 T424 S425 K441 T443 L454 P565 I566 D567 S594 D610 R723 H739 P740 S741 S763
Enzymatic activity
Enzyme Commision number 3.6.4.13: RNA helicase.
Gene Ontology
Molecular Function
GO:0002151 G-quadruplex RNA binding
GO:0003676 nucleic acid binding
GO:0003678 DNA helicase activity
GO:0003723 RNA binding
GO:0003724 RNA helicase activity
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0051880 G-quadruplex DNA binding
Biological Process
GO:0032508 DNA duplex unwinding
GO:0044806 G-quadruplex DNA unwinding
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:5n9f, PDBe:5n9f, PDBj:5n9f
PDBsum5n9f
PubMed
UniProtQ8SWT2

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