Structure of PDB 5mmg Chain A Binding Site BS01
Receptor Information
>5mmg Chain A (length=115) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNP
MDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLA
EVFEQEIDPVMQSLG
Ligand information
Ligand ID
UT0
InChI
InChI=1S/C19H20N2O4S/c1-4-25-19-8-6-15(13(2)22)11-17(19)20-16-7-5-14-9-10-21(18(14)12-16)26(3,23)24/h5-12,20H,4H2,1-3H3
InChIKey
OCKRWFCZZXKGGR-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
CCOc1ccc(cc1Nc2ccc3ccn(c3c2)[S](C)(=O)=O)C(C)=O
OpenEye OEToolkits 2.0.6
CCOc1ccc(cc1Nc2ccc3ccn(c3c2)S(=O)(=O)C)C(=O)C
Formula
C19 H20 N2 O4 S
Name
1-[4-ethoxy-3-[(1-methylsulfonylindol-6-yl)amino]phenyl]ethanone;
UT07C
ChEMBL
DrugBank
ZINC
PDB chain
5mmg Chain A Residue 1201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5mmg
Binding Motifs in the CBP Bromodomain: An Analysis of 20 Crystal Structures of Complexes with Small Molecules.
Resolution
1.23 Å
Binding residue
(original residue number in PDB)
L1109 P1110 V1115 L1120 N1168 R1173 V1174
Binding residue
(residue number reindexed from 1)
L27 P28 V33 L38 N86 R91 V92
Annotation score
1
Binding affinity
MOAD
: Kd=0.97uM
PDBbind-CN
: -logKd/Ki=6.01,Kd=0.970uM
Enzymatic activity
Enzyme Commision number
2.3.1.-
2.3.1.48
: histone acetyltransferase.
Gene Ontology
Molecular Function
GO:0004402
histone acetyltransferase activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5mmg
,
PDBe:5mmg
,
PDBj:5mmg
PDBsum
5mmg
PubMed
30258543
UniProt
Q92793
|CBP_HUMAN CREB-binding protein (Gene Name=CREBBP)
[
Back to BioLiP
]