Structure of PDB 5m6g Chain A Binding Site BS01

Receptor Information
>5m6g Chain A (length=579) Species: 1382595 (Saccharopolyspora erythraea D) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RPAYRDPRLPVPDRVDDLMARMSLDDKLGQMVQVERKAAGPQAVADHRIG
SVLSGGGSAPEPNTPQAWADMYDSYQRAALSTPLGIPLIYGVDAVHGHNN
VHGATIYPHNIGLGATGNPDLVQRIGAATAEEVAATGIDWSFAPCVCVAR
DDRWGRTYESFGEKSENASAMTSAVTGLQGEALGATPSSVMATAKHYVGD
GGTTGGDDQGNTEISEQELREIHLPPFREAIARGVGSVMVSYSSWNGEKL
HASTYLVNDVLKGELGFTGLVVSDYDAIDKLDGQEDFTPDEVRASVNAGI
DMFMMSSRHEKFIDYLRAEVEAGRVPAERIDDANRRILTKKFELGLFERP
FAQRDLLPTVGSAEHRELARQAVRESQVLLRNDGVLPLAKDGGKLFVAGK
NADDIGNQSGGWTISWQGSSGDITEGTTILEGIRAAASGSEVTYDRHGNG
VDGSYRAAIAVVGETPYAEFEGDRPGGLGLDEEDRATIAKLRASGVPVVV
VTVSGRPLDIAGEVDGWNALLASWLPGSEGQGVADVLFGDHNPTGKLPMT
WMRSFDQLPINDGDGQDPLFPHGFGLSYG
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain5m6g Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5m6g Crystal structure Glucan 1,4-beta-glucosidase from Saccharopolyspora erythraea
Resolution1.829 Å
Binding residue
(original residue number in PDB)		D315 D318 Q320 D322 E327
Binding residue
(residue number reindexed from 1)		D279 D282 Q284 D286 E291
Annotation score4
Enzymatic activity
Enzyme Commision number 3.2.1.21: beta-glucosidase.
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008422 beta-glucosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0031217 glucan 1,4-beta-glucosidase activity
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0009251 glucan catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5m6g, PDBe:5m6g, PDBj:5m6g
PDBsum5m6g
PubMed
UniProtA4FNP6

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