Structure of PDB 5m1q Chain A Binding Site BS01

Receptor Information
>5m1q Chain A (length=171) Species: 1406341 (Thermus phage G20c) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NSVFSGLDMLILLPYERRGTRLVVEDYRPDHIYCIGADFGNQDYSVFSVL
DLDTGAIACLERMNGATWSDQVARLKALSEDYGHAYVVADTWGVGDAIAE
ELDAQGINYTPLPVKSSSVKEQLISNLALLMEKGQVAVPNDKTILDELRN
FRYYGHDDIVMSLALAYSQYE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5m1q Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5m1q Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism.
Resolution1.45 Å
Binding residue
(original residue number in PDB)		D300 H427 D429
Binding residue
(residue number reindexed from 1)		D43 H156 D158
Annotation score4
Enzymatic activity
Enzyme Commision number 3.1.21.-
3.6.4.-
External links
PDB RCSB:5m1q, PDBe:5m1q, PDBj:5m1q
PDBsum5m1q
PubMed28100693
UniProtA0A1L4BKS3|TERL_BPG20 Terminase, large subunit (Gene Name=G20c_80)

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