Structure of PDB 5m0n Chain A Binding Site BS01
Receptor Information
>5m0n Chain A (length=423) Species:
946435
(Jeotgalicoccus sp. ATCC 8456) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HMATLKRDKGLDNTLKVLKQGYLYTTNQRNRLNTSVFQTKALGGKPFVVV
TGKEGAEMFYNNDVVQREGMLPKRIVNTLFGKGAIHTVDGKKHVDRKALF
MSLMTEGNLNYVRELTRTLWHANTQRMESMDEVNIYRESIVLLTKVGTRW
AGVQAPPEDIERIATDMDIMIDSFRALGGAFKGYKASKEARRRVEDWLEE
QIIETRKGNIHPPEGTALYEFAHWEDYLGNPMDSRTCAIDLMNTFRPLIA
INRFVSFGLHAMNENPITREKIKSEPDYAYKFAQEVRRYYPFVPFLPGKA
KVDIDFQGVTIPAGVGLALDVYGTTHDESLWDDPNEFRPERFETWDGSPF
DLIPQGGGDYWTNHRCAGEWITVIIMEETMKYFAEKITYDVPEQDLEVDL
NSIPGYVKSGFVIKNVREVVDRT
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
5m0n Chain A Residue 501 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5m0n
Catalytic Determinants of Alkene Production by the Cytochrome P450 Peroxygenase OleTJE.
Resolution
1.44 Å
Binding residue
(original residue number in PDB)
Y59 R66 H85 H92 K96 F99 N242 T243 P246 L247 A249 I250 F291 L295 Q354 H363 C365 G367 T371
Binding residue
(residue number reindexed from 1)
Y60 R67 H86 H93 K97 F100 N243 T244 P247 L248 A250 I251 F292 L296 Q355 H364 C366 G368 T372
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004497
monooxygenase activity
GO:0005506
iron ion binding
GO:0016491
oxidoreductase activity
GO:0016705
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0016125
sterol metabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5m0n
,
PDBe:5m0n
,
PDBj:5m0n
PDBsum
5m0n
PubMed
28053093
UniProt
E9NSU2
[
Back to BioLiP
]