Structure of PDB 5la2 Chain A Binding Site BS01

Receptor Information
>5la2 Chain A (length=464) Species: 1515 (Acetivibrio thermocellus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPQRGRPRLNAARTTFVGDNGQPLRGPYTSTEWTAAAPYDQIARVKELGF
NAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGLYLVITIGNG
ANNGNHNAQWARDFWKFYAPRYAKETHVLYEIHNEPVAWGPPYSSSTANP
PGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGGKGGAAEALKDIRAFNKA
VFGNENAVWTNEAVAFHGYAGWQETTIAVEELLKAGYPCFMTSYAGGLDV
ELTYELERLGVSWLTFQYIPPTGVSDDVTKPEYFSALVENSGLSWTPDYG
NWPAARGVYGNGGLARETAGTTRIEAEDFDWGGNGVSYYDTDSVNVGGQY
RPDEGVDIEKTSDTGGGYNVGWISEGEWLEYTIRVRNPGYYNLSLRVAGI
SGSRVQVSFGNQDKTGVWELPATGGFQTWTTATRQVFLGAGLQKLRINAL
SGGFNLNWIELSPI
Ligand information
Ligand IDXYS
InChIInChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3+,4-,5+/m1/s1
InChIKeySRBFZHDQGSBBOR-LECHCGJUSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C1C(C(C(C(O1)O)O)O)O
CACTVS 3.341O[CH]1CO[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0C1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O
CACTVS 3.341O[C@@H]1CO[C@H](O)[C@H](O)[C@H]1O
ACDLabs 10.04OC1C(O)COC(O)C1O
FormulaC5 H10 O5
Namealpha-D-xylopyranose;
alpha-D-xylose;
D-xylose;
xylose;
XYLOPYRANOSE
ChEMBL
DrugBankDB03389
ZINCZINC000001529214
PDB chain5la2 Chain C Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5la2 The Mechanism by Which Arabinoxylanases Can Recognize Highly Decorated Xylans.
Resolution1.65 Å
Binding residue
(original residue number in PDB)		N139 N170 E171 Y255 S279 F310
Binding residue
(residue number reindexed from 1)		N103 N134 E135 Y219 S243 F266
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0030246 carbohydrate binding
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5la2, PDBe:5la2, PDBj:5la2
PDBsum5la2
PubMed27531750
UniProtA3DHG6

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