Structure of PDB 5kzt Chain A Binding Site BS01

Receptor Information
>5kzt Chain A (length=509) Species: 393133 (Listeria monocytogenes 10403S) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SGEQVLNLTESALIPSADSTKADDQVGLNVVNQTNEGLYALDKDGIPAIA
GAAEEPKISDDKTVYTIKLREDAKWSNGDPVTANDYVYSWRRAVDPNTAA
TYSYLFDAIKNGGDIVAGKKKPEELGIKAVDDYTLEVTLSKPTAYINSLF
AFPTFFPLNEKFVTEKGEKYAQNSDNMLFNGPFELKDWTGTNKKWTYVKN
DKYWDKDKVKLKQINVQVVQDSGTGLNLYNTDKVDRTVLSADYAAQNKNN
KDYVTVNNSSTFYIKFNQKRAGKDTVFANKNIRKAIALAIDKQSYTDTVL
KNGSKPANNLVPEGFTFDPGNKEDYTKESGKHLEYDVKEAQKAWKAGLKE
LGVNEITVEFTSDDTENARKSSEFIQDQLQKNLDGLTVKLKNVPFKVRLQ
NDQNQDYDFSMSGWGPDYQDPSTFLDLFVTDGAQNRMSYSNKDYDKILND
QKRWDEMVKAEKILLTDDVAIQPLYQRSTAYLQKDYIKNLQKNPFGPDYT
YKETYLTKL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5kzt Listeria monocytogenes OppA bound to peptide
Resolution1.85 Å
Binding residue
(original residue number in PDB)
D64 D65 Q66 Y143 S301 F303 Y336 D404 T406 S412 F436 G454 W455 G456 D458 Q475 Y525 R527
Binding residue
(residue number reindexed from 1)
D23 D24 Q25 Y102 S260 F262 Y295 D363 T365 S371 F395 G413 W414 G415 D417 Q434 Y475 R477
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0015833 peptide transport
GO:0055085 transmembrane transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space
GO:0043190 ATP-binding cassette (ABC) transporter complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5kzt, PDBe:5kzt, PDBj:5kzt
PDBsum5kzt
PubMed
UniProtA0A0H3GJB6

[Back to BioLiP]