Structure of PDB 5kzk Chain A Binding Site BS01

Receptor Information
>5kzk Chain A (length=262) Species: 266834 (Sinorhizobium meliloti 1021) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GQVKEVTSLTNPIVKDIRALTQKKHRDETRSFMAEGLKLVIDALDLGWKI
KTLVYPQVEQVAAKTVARGGLVLEVNEKVISTITRRDNPQMVVGIFEQRY
SPLRDIHPQEGETYVALDRVRDPGNLGTIIRTADAAGASGIILVGETTDP
FSLETVRATMGSVFAIPIARANTEDFIRWQRAAGVQVVATHLAGSVDYRT
IDYKSKPVVLLMGNEQAGLPVELAREAGALARIPQAGRADSLNLAIATGI
MLFEARRHLLSL
Ligand information
Ligand IDCO
InChIInChI=1S/Co/q+2
InChIKeyXLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Co+2]
CACTVS 3.341[Co++]
FormulaCo
NameCOBALT (II) ION
ChEMBL
DrugBankDB14205
ZINC
PDB chain5kzk Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5kzk Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
Resolution2.28 Å
Binding residue
(original residue number in PDB)		H40 E43
Binding residue
(residue number reindexed from 1)		H25 E28
Annotation score3
Enzymatic activity
Enzyme Commision number 2.1.1.-
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0008168 methyltransferase activity
GO:0008173 RNA methyltransferase activity
Biological Process
GO:0006396 RNA processing
GO:0032259 methylation
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5kzk, PDBe:5kzk, PDBj:5kzk
PDBsum5kzk
PubMed
UniProtQ92SJ4

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