Structure of PDB 5kdn Chain A Binding Site BS01

Receptor Information
>5kdn Chain A (length=507) Species: 195103 (Clostridium perfringens ATCC 13124) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SVLELEMRGDSISEAKKRKVWNFQDWQITGLSARAGDKITVYVDVAEGDP
TPTLLYKQSLTQHGGATSFQLKPGKNEITIPEINYESNGIPKDVIQGGDL
FFTNYKSDSQKRAPKVRIEGASKYPVFILGKSDENEVMKELEAYVEKIKA
EPKTTPNIFAVSSNKSLEFVQATYALDWYKKNNKTPKYTAEQWDQYIADA
MGFWGFDNSKDVNSDFNFRIMPMVKNLSGGAFMNAGNGVIGIRPGNQDAI
LAANKGWGVAHELGHNFDTGGRTIVEVTNNMMPLFFESKYKTKTRITDQN
IWENNTYPKVGLDDYSNNELYNKADSTHLAQLAPLWQLYLYDNTFYGKFE
RQFRERDFGNKNREDIYKSWVVAASDAMELDLTEFFARHGIRVDDKVKED
LAKYPKPDKKIYYLNDLAMNYKGDGFTENAKVSVSTSGSNGNIKLSFSVD
DENKDNILGYEIRRDGKYVGFTSNDSFVDTKSNLDEDGVYVVTPYDRKLN
TLNPIEV
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5kdn Chain A Residue 1106 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5kdn Recognition of protein-linked glycans as a determinant of peptidase activity.
Resolution1.66 Å
Binding residue
(original residue number in PDB)		H756 H760 E771
Binding residue
(residue number reindexed from 1)		H261 H265 E276
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links