Structure of PDB 5kd8 Chain A Binding Site BS01

Receptor Information
>5kd8 Chain A (length=537) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SDKWEKEFRIRSYEPYSNIAEWADKLMTKKYSDLDNPTGISVKAGDDIIV
LVGDTYGQNISMQCIWETGTEYKQTASSGDVYMLNPGVNKLTMKGEGQLF
VMYNTELTSNTAKPIKIHIPLGSGTVNGFFDLKEHKTDEKYAELLKKSTH
KYFCIRGEKIMFYFHRNKLLEYVPNNILSAIHLWDNIVGWQQELMGIDDV
RPSQVNNHLFAISPEGSYMWASDYQIGFVYTYLGNILLEDNVMAAEDNAW
GPAHEIGHVHQAAINWASSTESSNNLFSNFIIYKLGKYKSRGNGLGSVAT
ARYANGQAWYNMGDATHQNEDTETHMRMNWQLWIYYHRCEYKTDFWQTLF
KLMREVNMTEGEDPGKKQLEFAKMASKAANQNLTDFFEMWGFFEPVNTTI
EQYGTYKYYVSDAMIREAKEYMAQFPAPKHAFQYIEDRKKSEFPSNDYRY
SAVGDVGYYTQFKENQKITKAITAELAGRKVSIQNGDEAVAFELRENDEN
GKLLYFSTFTTFEIPSSILMVNAKLYAVQADGKRILL
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5kd8 Chain A Residue 901 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5kd8 Recognition of protein-linked glycans as a determinant of peptidase activity.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		H574 H578 E591
Binding residue
(residue number reindexed from 1)		H254 H258 E271
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links