Structure of PDB 5j3u Chain A Binding Site BS01
Receptor Information
>5j3u Chain A (length=261) Species:
5811
(Toxoplasma gondii) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
VYEKDEGQKEQLERILRQSFLFNSLDEKDLNTVILAMQEKKIEASTCLIR
EGDDGECLYIVQSGELNCSKLIDGEERVVKVVGPGDAFGELALLYNAPRA
ATVTSVSACDLWELGRDTFNAIVKDAATKRRSMYDSFLKSVHILDGMDAY
ERGKVADALRTEMFTDGAYIVRQGELGDVFYIVEEGSAVATKSFGPGQPP
IEVKKYQAGDYFGELALINEEPRAANVIAHGICKVACLERKSFKRLMGSV
QDLLSKKASEY
Ligand information
Ligand ID
CMP
InChI
InChI=1S/C10H12N5O6P/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7-4(20-10)1-19-22(17,18)21-7/h2-4,6-7,10,16H,1H2,(H,17,18)(H2,11,12,13)/t4-,6-,7-,10-/m1/s1
InChIKey
IVOMOUWHDPKRLL-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(O4)O)O)N
ACDLabs 10.04
O=P3(OCC4OC(n1c2ncnc(N)c2nc1)C(O)C4O3)O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)CO[P@](=O)(O4)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](O)(=O)O[CH]4[CH]3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P@](O)(=O)O[C@H]4[C@H]3O
Formula
C10 H12 N5 O6 P
Name
ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE;
CYCLIC AMP;
CAMP
ChEMBL
CHEMBL316966
DrugBank
DB02527
ZINC
ZINC000003873977
PDB chain
5j3u Chain A Residue 501 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5j3u
Co-crystal structure of the regulatory domain of Toxoplasma gondii PKA with cAMP
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
K336 Y350 F356 G357 E358 L359 A360 R367 A368 A369 Y405
Binding residue
(residue number reindexed from 1)
K192 Y206 F212 G213 E214 L215 A216 R223 A224 A225 Y261
Annotation score
2
Enzymatic activity
Enzyme Commision number
2.7.11.12
: cGMP-dependent protein kinase.
Gene Ontology
Molecular Function
GO:0008603
cAMP-dependent protein kinase regulator activity
Biological Process
GO:0001932
regulation of protein phosphorylation
Cellular Component
GO:0005952
cAMP-dependent protein kinase complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5j3u
,
PDBe:5j3u
,
PDBj:5j3u
PDBsum
5j3u
PubMed
UniProt
A0A0F7V8B2
[
Back to BioLiP
]