Structure of PDB 5j3r Chain A Binding Site BS01
Receptor Information
>5j3r Chain A (length=114) Species:
559292
(Saccharomyces cerevisiae S288C) [
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AFNVQKEYSLILDLSPIIIFSKSTCSYSKGMKELLENEYQFIPNYYIIEL
DKHGHGEELQEYIKLVTGRGTVPNLLVNGVSRGGNEEIKKLHTQGKLLES
LQVWSDGKFSVEQR
Ligand information
Ligand ID
FES
InChI
InChI=1S/2Fe.2S
InChIKey
NIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0
S1[Fe]S[Fe]1
Formula
Fe2 S2
Name
FE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
5j3r Chain A Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
5j3r
Crystal structure of yeast monothiol glutaredoxin Grx6 in complex with a glutathione-coordinated [2Fe-2S] cluster
Resolution
2.46 Å
Binding residue
(original residue number in PDB)
C136 S137 Y138
Binding residue
(residue number reindexed from 1)
C25 S26 Y27
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004362
glutathione-disulfide reductase (NADPH) activity
GO:0005506
iron ion binding
GO:0015038
glutathione disulfide oxidoreductase activity
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051537
2 iron, 2 sulfur cluster binding
Biological Process
GO:0006879
intracellular iron ion homeostasis
GO:0016226
iron-sulfur cluster assembly
GO:0034599
cellular response to oxidative stress
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0000324
fungal-type vacuole
GO:0005737
cytoplasm
GO:0005773
vacuole
GO:0005789
endoplasmic reticulum membrane
GO:0005794
Golgi apparatus
GO:0005796
Golgi lumen
GO:0005801
cis-Golgi network
GO:0016020
membrane
GO:1990229
iron-sulfur cluster assembly complex
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Molecular Function
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Cellular Component
External links
PDB
RCSB:5j3r
,
PDBe:5j3r
,
PDBj:5j3r
PDBsum
5j3r
PubMed
27710937
UniProt
Q12438
|GLRX6_YEAST Monothiol glutaredoxin-6 (Gene Name=GRX6)
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