Structure of PDB 5iyv Chain A Binding Site BS01

Receptor Information
>5iyv Chain A (length=588) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MGSLNQDATILRQAKLGLSDPAQSLSSWSDVTPCKWLGVSCDATSNVVSV
DLSSFMLVGPFPSILCHLPSLHSLSLYNNSINGSLSADDFDTCHNLISLD
LSENLLVGSIPKSLPFNLPNLKFLEISGNNLSDTIPSSFGEFRKLESLNL
AGNFLSGTIPASLGNVTTLKELKLAYNLFSPSQIPSQLGNLTELQVLWLA
GCNLVGPIPPSLSRLTSLVNLDLTFNQLTGSIPSWITQLKTVEQIELFNN
SFSGELPESMGNMTTLKRFDASMNKLTGKIPDNLNLLNLESLNLFENMLE
GPLPESITRSKTLSELKLFNNRLTGVLPSQLGANSPLQYVDLSYNRFSGE
IPANVCGEGKLEYLILIDNSFSGEISNNLGKCKSLTRVRLSNNKLSGQIP
HGFWGLPRLSLLELSDNSFTGSIPKTIIGAKNLSNLRISKNRFSGSIPNE
IGSLNGIIEISGAENDFSGEIPESLVKLKQLSRLDLSKNQLSGEIPRELR
GWKNLNELNLANNHLSGEIPKEVGILPVLNYLDLSSNQFSGEIPLELQNL
KLNVLNLSYNHLSGKIPPLYANKIYAHDFIGNPGLCVD
Ligand information
>5iyv Chain B (length=12) Species: 3702 (Arabidopsis thaliana) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
LVPPSGPSMRHN
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5iyv Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission.
Resolution2.56 Å
Binding residue
(original residue number in PDB)
W218 D242 Q264 E266 F268 R288 D290 K337 F339 D361 Y364 Y383 R407 R409
Binding residue
(residue number reindexed from 1)
W198 D222 Q244 E246 F248 R268 D270 K317 F319 D341 Y344 Y363 R387 R389
Enzymatic activity
Enzyme Commision number 2.7.10.1: receptor protein-tyrosine kinase.
2.7.11.1: non-specific serine/threonine protein kinase.
External links
PDB RCSB:5iyv, PDBe:5iyv, PDBj:5iyv
PDBsum5iyv
PubMed27058169
UniProtP47735|RLK5_ARATH Receptor-like protein kinase 5 (Gene Name=RLK5)

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