Structure of PDB 5ir1 Chain A Binding Site BS01

Receptor Information

>5ir1 Chain A (length=213) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

DILLTQSPVILSVSPGERVSFSCRASQSIGTNIHWYQQRTNGSPRLLIKY
ASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQNNNWPTTFGA
GTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV
DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNRGA

Ligand information

>5ir1 Chain E (length=12) Species: 32630 (synthetic construct) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

GQFDLSTRRLKG

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5ir1 Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.
Resolution	2.482 Å
Binding residue (original residue number in PDB)	T40 N41 G42 A84 D85 Y87 A100 E165
Binding residue (residue number reindexed from 1)	T40 N41 G42 A84 D85 Y87 A100 E165

External links

PDB	RCSB:5ir1, PDBe:5ir1, PDBj:5ir1
PDBsum	5ir1
PubMed	27834791

[Back to BioLiP]