Structure of PDB 5gmy Chain A Binding Site BS01

Receptor Information
>5gmy Chain A (length=848) Species: 224325 (Archaeoglobus fulgidus DSM 4304) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ESWFKKYWHLSVLVIAALISVKLRILNPWNSVFTWTVRLGGNDPWYYYRL
IENTIHNFPHRIWFDPFTYYPYGSYTHFGPFLVYLGSIAGIIFSATSGES
LRAVLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIAIVPGQFLQR
SILGFNDHHIWEAFWQVSALGTFLLAYNRWKGHDLSHNLTARQMAYPVIA
GITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTF
AVSALIYLPFAFNYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVG
FFERVGLGRKGMPLAVIVLTALIMGLFFVIPKGGALTIAEVYPFFFTHNG
EFTLTNAVLHFGALFFFGMAGILYSAYRFLKRRSFPEMALLIWAIAMFIA
LWGQNRFAYYFAAVSAVYSALALSVVFDKLHLYRALENAIGARNKLSYFR
VAFALLIALAAIYPTYILADAQSSYAGGPNKQWYDALTWMRENTPDGEKY
DEYYLQLYPTPQSNKEPFSYPFETYGVISWWDYGHWIEAVAHRMPIANPF
QAGIGNKYNNVPGASSFFTAENESYAEFVAEKLNVKYVVSDIEMETCKYY
AMAVWAEGDLPLAEKYYGGYFYYSPTGTFGYANSQWDIPLNSIIIPLRIP
SELYYSTMEAKLHLFDGSGLSHYRMIYESDYPAEWKSYSSQVNLNNESQV
LQTALYEAVMRARYGVSPTMGTQEVLYKYAYTQLYEKKMGIPVKIAPSGY
VKIFERVKGAVVTGKVSANVTEVSVNATIKTNQNRTFEYWQTVEVKNGTY
TVVLPYSHNSDYPVKPITPYHIKAGNVVKEITIYESQVQNGEIIQLDL
Ligand information
Receptor-Ligand Complex Structure
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PDB5gmy Tethering an N-Glycosylation Sequon-Containing Peptide Creates a Catalytically Competent Oligosaccharyltransferase Complex
Resolution3.5 Å
Binding residue
(original residue number in PDB)		D47 Q153 F159 T357 A359 E360 W550 W551 D552 C617 K618
Binding residue
(residue number reindexed from 1)		D43 Q149 F155 T337 A339 E340 W530 W531 D532 C597 K598
Enzymatic activity
Enzyme Commision number 2.4.99.21: dolichyl-phosphooligosaccharide-protein glycotransferase.
Gene Ontology
Molecular Function
GO:0004576 oligosaccharyl transferase activity
GO:0016757 glycosyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006486 protein glycosylation
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5gmy, PDBe:5gmy, PDBj:5gmy
PDBsum5gmy
PubMed27997792
UniProtO29867|AGLB3_ARCFU Dolichyl-phosphooligosaccharide-protein glycotransferase 3 (Gene Name=aglB3)

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